STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4BHH8_LOTGIUncharacterized protein. (684 aa)    
Predicted Functional Partners:
V4CP36_LOTGI
Uncharacterized protein.
   
 
0.717
V3ZRX1_LOTGI
Uncharacterized protein; Belongs to the phosphohexose mutase family.
   
    0.544
V3ZLT4_LOTGI
NTP_transferase domain-containing protein.
 
  
   0.516
V4AEK8_LOTGI
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
 0.468
V4A0G4_LOTGI
Uncharacterized protein.
      
 0.461
V4AAF6_LOTGI
Ubiquitin-like domain-containing protein.
    
 0.458
V4C357_LOTGI
Ubiquitin-like domain-containing protein.
    
 0.458
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.