STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4BP40_LOTGIWD_REPEATS_REGION domain-containing protein. (407 aa)    
Predicted Functional Partners:
V3ZSV2_LOTGI
Ribosomal_L16 domain-containing protein.
    
 
 0.988
V4CH49_LOTGI
WD_REPEATS_REGION domain-containing protein.
   
  
 0.926
V3ZVC6_LOTGI
Ribosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family.
    
 
 0.712
V4AK82_LOTGI
Fes1 domain-containing protein.
    
 
 0.712
V4B7X2_LOTGI
Uncharacterized protein.
    
 
 0.712
V4AU89_LOTGI
WD_REPEATS_REGION domain-containing protein.
   
  
 0.708
V3ZQH6_LOTGI
WD_REPEATS_REGION domain-containing protein.
   
   
0.699
V4AJZ9_LOTGI
60S ribosomal export protein NMD3; Acts as an adapter for the XPO1/CRM1-mediated export of the 60S ribosomal subunit; Belongs to the NMD3 family.
   
  
 0.693
V3ZJA5_LOTGI
Uncharacterized protein.
     
 0.673
V3ZWN4_LOTGI
CP-type G domain-containing protein.
   
  
 0.618
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.