STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Syt16Synaptotagmin 16. (501 aa)    
Predicted Functional Partners:
V4BTZ8_LOTGI
RabBD domain-containing protein.
     
 0.554
V3ZNF0_LOTGI
Uncharacterized protein; Belongs to the MAGUK family.
     
 0.536
V4BV73_LOTGI
Uncharacterized protein.
     
 0.536
V4A432_LOTGI
DUF667 domain-containing protein.
      
 0.535
V4BKW3_LOTGI
Uncharacterized protein.
     
 0.513
V4CG23_LOTGI
Ubiquitin-like domain-containing protein.
      
 0.468
V3ZZ37_LOTGI
Uncharacterized protein.
   
 0.449
V4AF49_LOTGI
Uncharacterized protein.
     
0.448
V4AYH8_LOTGI
Uncharacterized protein.
     
 0.448
V4BSP2_LOTGI
Uncharacterized protein; Belongs to the Stoned B family.
   
 0.443
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.