STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4C485_LOTGIDNA_mis_repair domain-containing protein. (333 aa)    
Predicted Functional Partners:
V3ZN41_LOTGI
DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).
 
 0.983
V4A064_LOTGI
PWWP domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).
 
 0.977
V4B4P5_LOTGI
DNA_MISMATCH_REPAIR_2 domain-containing protein; Component of the post-replicative DNA mismatch repair system (MMR).
 
 0.942
V4CPC0_LOTGI
DNA_MISMATCH_REPAIR_2 domain-containing protein.
 
 0.934
V4B1I5_LOTGI
Uncharacterized protein.
  
 
0.927
V4AGJ6_LOTGI
DNA_MISMATCH_REPAIR_2 domain-containing protein.
 
 0.921
V4A877_LOTGI
Uncharacterized protein.
    
 0.917
V3Z9S6_LOTGI
Uncharacterized protein.
   
 0.911
V4ASC3_LOTGI
DNA_mis_repair domain-containing protein.
    
 0.876
V4B6C5_LOTGI
Uncharacterized protein.
  
0.822
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.