STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4C7F1_LOTGIUncharacterized protein; Belongs to the nucleosome assembly protein (NAP) family. (335 aa)    
Predicted Functional Partners:
V4AIS9_LOTGI
Histone H2A; Belongs to the histone H2A family.
   
 
 0.984
V4A6L1_LOTGI
Importin N-terminal domain-containing protein.
   
 
 0.898
V3ZSN5_LOTGI
Uncharacterized protein.
   
 
 0.837
V4C8C2_LOTGI
Protein kinase domain-containing protein.
 
  
 
 0.826
V4AP01_LOTGI
Uncharacterized protein.
   
 
 0.824
V4B8P1_LOTGI
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
   0.680
V3ZYL0_LOTGI
Cytoplasmic FMR1-interacting protein; Belongs to the CYFIP family.
    
 
 0.637
V4CJS3_LOTGI
Uncharacterized protein.
   
  
 0.637
V3ZBB5_LOTGI
Eukaryotic translation initiation factor 3 subunit E; Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation.
   
 
 0.617
V4AXG7_LOTGI
COMM domain-containing protein.
      
 0.603
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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