STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4CCR8_LOTGIUncharacterized protein. (353 aa)    
Predicted Functional Partners:
V4A4Q4_LOTGI
Protein lin-7 homolog; Plays a role in establishing and maintaining the asymmetric distribution of channels and receptors at the plasma membrane of polarized cells; Belongs to the lin-7 family.
      
 0.597
V4BFD7_LOTGI
Uncharacterized protein.
   
  
 0.561
V4BX81_LOTGI
Methyltranfer_dom domain-containing protein.
    
 
 0.553
V4B6C3_LOTGI
Uncharacterized protein.
      
 0.540
V3ZVW5_LOTGI
Uncharacterized protein.
   
 0.526
V3ZPN6_LOTGI
Rho-GAP domain-containing protein.
   
  
 0.496
V3ZV42_LOTGI
Uncharacterized protein.
    
 
 0.482
V4B3E1_LOTGI
Uncharacterized protein.
      
 0.437
V3ZM39_LOTGI
Nudix hydrolase domain-containing protein.
      
 0.418
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.