STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4CEI2_LOTGIUncharacterized protein. (567 aa)    
Predicted Functional Partners:
V3ZSM7_LOTGI
DUF3677 domain-containing protein.
   
 0.968
V3YZW7_LOTGI
Uncharacterized protein.
   
 0.965
V3ZJ63_LOTGI
Uncharacterized protein.
    
 0.965
V4AE30_LOTGI
Uncharacterized protein.
   
 0.965
V4B9U1_LOTGI
Beta-Casp domain-containing protein.
    
 0.965
V4AEU5_LOTGI
PHD-type domain-containing protein.
    
 0.961
V4B4H1_LOTGI
Uncharacterized protein.
    
 0.956
V3ZW05_LOTGI
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.
   
  0.925
V4ALU5_LOTGI
Uncharacterized protein.
    
  0.924
V4CQR2_LOTGI
Uncharacterized protein.
    
  0.924
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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