STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4CJD3_LOTGIB30.2/SPRY domain-containing protein. (502 aa)    
Predicted Functional Partners:
V4ABI2_LOTGI
Uncharacterized protein.
   
 0.777
V3YZF6_LOTGI
Uncharacterized protein.
   
 0.720
V4C1M9_LOTGI
RRM domain-containing protein.
   
 0.676
V4C1G2_LOTGI
Uncharacterized protein.
   
 0.656
V4CP67_LOTGI
RING-type domain-containing protein.
 
 
    0.650
V4B731_LOTGI
CSD_1 domain-containing protein.
    
 0.646
V4AKH2_LOTGI
RRM domain-containing protein.
   
 0.637
V3ZM21_LOTGI
Uncharacterized protein.
   
 0.619
V4AYM7_LOTGI
Nuclear cap-binding protein subunit 2.
    
 0.607
V3ZPS4_LOTGI
RRM domain-containing protein.
   
 0.600
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.