STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4CJP9_LOTGIOne cut domain family member. (384 aa)    
Predicted Functional Partners:
V4AIH2_LOTGI
ORC_WH_C domain-containing protein.
    
 
 0.688
V4AJL5_LOTGI
Serine/threonine-protein phosphatase.
   
  
 0.675
V4ALQ0_LOTGI
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
      
 0.672
V4AQ45_LOTGI
Uncharacterized protein.
      
 0.634
V4BLD9_LOTGI
POU domain protein.
   
 
 0.539
V3ZEX4_LOTGI
DUF4210 domain-containing protein.
      
 0.529
V4ACN5_LOTGI
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily. Tyr protein kinase family.
      
 0.470
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.