STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4CKN2_LOTGITSNAXIP1_N domain-containing protein. (508 aa)    
Predicted Functional Partners:
V4C658_LOTGI
Uncharacterized protein.
   
 0.999
V4BKW3_LOTGI
Uncharacterized protein.
    
 0.970
V3ZM17_LOTGI
Clathrin light chain; Clathrin is the major protein of the polyhedral coat of coated pits and vesicles; Belongs to the clathrin light chain family.
   
 0.928
V4CP44_LOTGI
AP complex subunit beta.
   
 0.915
V4BV65_LOTGI
Arrestin_C domain-containing protein.
    
 0.864
V3ZUY7_LOTGI
Uncharacterized protein.
    
 0.847
V4A587_LOTGI
VPS10 domain-containing protein.
    
 0.780
V4A8L9_LOTGI
Uncharacterized protein.
    
 0.765
V4BM87_LOTGI
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
   
 0.749
V4B7A7_LOTGI
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
    
 0.722
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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