STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4CLP1_LOTGIUncharacterized protein. (236 aa)    
Predicted Functional Partners:
V3ZWL4_LOTGI
SE domain-containing protein.
   
 
 0.997
V3ZP99_LOTGI
Uncharacterized protein; Belongs to the cytochrome P450 family.
  
 
 0.982
V4CII0_LOTGI
Fatty acid hydroxylase domain-containing protein; Belongs to the sterol desaturase family.
  
 
 0.979
V3ZZ16_LOTGI
Methyltransf_11 domain-containing protein.
   
 0.976
V4APK8_LOTGI
Uncharacterized protein.
   
 
 0.974
V3ZH85_LOTGI
Uncharacterized protein.
   
 
 0.959
V4BCK5_LOTGI
3-hydroxy-3-methylglutaryl coenzyme A synthase; This enzyme condenses acetyl-CoA with acetoacetyl-CoA to form HMG-CoA, which is the substrate for HMG-CoA reductase.
   
 
 0.949
V4ARC7_LOTGI
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
  
 0.943
V4AUC8_LOTGI
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
  
 0.943
V4A208_LOTGI
Uncharacterized protein; Belongs to the FPP/GGPP synthase family.
  
 0.941
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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