STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4CMF0_LOTGIUncharacterized protein. (292 aa)    
Predicted Functional Partners:
V3ZQI1_LOTGI
Uncharacterized protein.
   
 0.952
V3ZQI5_LOTGI
PH domain-containing protein.
    
 0.946
V4A857_LOTGI
Uncharacterized protein.
   
 0.922
V4AHI6_LOTGI
SH2 domain-containing protein.
 
      0.900
V3ZWY1_LOTGI
Uncharacterized protein.
    
 0.860
V3ZQI6_LOTGI
SH3 domain-containing protein.
   
 0.822
V4BBL4_LOTGI
PH domain-containing protein.
    
 0.804
V4B209_LOTGI
Receptor protein-tyrosine kinase.
    
 0.662
V4B615_LOTGI
Recep_L_domain domain-containing protein.
    
 0.662
V4B7Z3_LOTGI
Protein kinase domain-containing protein.
    
 0.662
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.