STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4CMJ3_LOTGICYCLIN domain-containing protein; Belongs to the cyclin family. (240 aa)    
Predicted Functional Partners:
V3ZPP1_LOTGI
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.780
V4AKM7_LOTGI
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
   
 0.780
V4B283_LOTGI
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
    
 0.752
V4B6R3_LOTGI
Uncharacterized protein.
    
 0.752
V4CI10_LOTGI
Uncharacterized protein.
    
 0.752
V4B4X5_LOTGI
Transcription elongation factor SPT4; Component of the DRB sensitivity-inducing factor complex (DSIF complex), which regulates transcription elongation by RNA polymerase II; Belongs to the SPT4 family.
    
 0.724
V3ZQF2_LOTGI
CYCLIN domain-containing protein; Belongs to the cyclin family.
     
 0.712
V4AYP6_LOTGI
TFIIB-type domain-containing protein.
     
 0.699
V3ZZK1_LOTGI
Uncharacterized protein.
    
 0.679
V3ZU10_LOTGI
RNA polymerase II subunit A C-terminal domain phosphatase; This promotes the activity of RNA polymerase II.
   
 
 0.670
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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