STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4CN43_LOTGIChitin-binding type-2 domain-containing protein; Belongs to the glycosyl hydrolase 18 family. (883 aa)    
Predicted Functional Partners:
V3ZMB9_LOTGI
Beta-hexosaminidase.
    
 0.720
V3ZNG0_LOTGI
Beta-hexosaminidase.
    
 0.720
V3ZPJ1_LOTGI
CHB_HEX domain-containing protein.
    
 0.720
V3ZU05_LOTGI
CHB_HEX domain-containing protein.
    
 0.720
V3ZWU0_LOTGI
CHB_HEX domain-containing protein.
    
 0.720
V4A714_LOTGI
Beta-hexosaminidase.
    
 0.720
V4AGI1_LOTGI
Uncharacterized protein.
    
 0.720
V4CGC7_LOTGI
Uncharacterized protein.
    
 0.720
V4CMZ2_LOTGI
Glyco_hydro_20 domain-containing protein.
    
 0.720
V3Z1E9_LOTGI
Uncharacterized protein.
     
  0.650
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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