STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4CNF9_LOTGIUncharacterized protein. (864 aa)    
Predicted Functional Partners:
V3ZLF7_LOTGI
Uncharacterized protein.
    
 0.650
V4ABB1_LOTGI
Spatacsin_C domain-containing protein.
    
 
 0.563
V4AJQ2_LOTGI
Uncharacterized protein.
    
 0.521
V4B925_LOTGI
FYVE-type domain-containing protein.
      
 0.515
V4CRV3_LOTGI
MHD domain-containing protein; Belongs to the adaptor complexes medium subunit family.
     
 0.443
V4CP44_LOTGI
AP complex subunit beta.
     
 0.442
V4A112_LOTGI
AP-2 complex subunit alpha; Adaptins are components of the adaptor complexes which link clathrin to receptors in coated vesicles. Clathrin-associated protein complexes are believed to interact with the cytoplasmic tails of membrane proteins, leading to their selection and concentration.
     
 0.419
V3ZV51_LOTGI
AP complex subunit sigma; Belongs to the adaptor complexes small subunit family.
     
 0.418
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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