STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4CNP4_LOTGIPCI domain-containing protein. (406 aa)    
Predicted Functional Partners:
V3Z109_LOTGI
PCI domain-containing protein.
   
 0.999
V3ZN90_LOTGI
MPN domain-containing protein.
   
 0.999
V4A253_LOTGI
PCI domain-containing protein.
   
 0.999
V4B4Y1_LOTGI
PCI domain-containing protein.
   
 0.999
V4CFG1_LOTGI
CSN8_PSD8_EIF3K domain-containing protein.
   
 0.999
V4CMN0_LOTGI
MPN domain-containing protein.
   
 0.999
V4CCB9_LOTGI
PCI domain-containing protein.
   
 0.998
V3ZVU6_LOTGI
RING-type domain-containing protein.
   
 0.975
V4AGG8_LOTGI
Uncharacterized protein.
   
 0.975
V4B2P1_LOTGI
Ubiquitin-like domain-containing protein.
   
 0.969
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.