STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4CPC0_LOTGIDNA_MISMATCH_REPAIR_2 domain-containing protein. (909 aa)    
Predicted Functional Partners:
V4AGJ6_LOTGI
DNA_MISMATCH_REPAIR_2 domain-containing protein.
  
0.997
V4C485_LOTGI
DNA_mis_repair domain-containing protein.
 
 0.934
V4B6C5_LOTGI
Uncharacterized protein.
 
 0.902
V3ZQ00_LOTGI
DNA_mis_repair domain-containing protein.
 
 0.890
V4B1I5_LOTGI
Uncharacterized protein.
 
 0.847
V3ZYD5_LOTGI
Uncharacterized protein.
    
 
 0.837
V4BFG0_LOTGI
ERCC4 domain-containing protein.
    
 
 0.837
V3ZFR6_LOTGI
MutL_C domain-containing protein.
  
 0.836
V4B982_LOTGI
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.830
V3Z9S6_LOTGI
Uncharacterized protein.
   
 0.820
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
Server load: low (20%) [HD]