STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4CQ75_LOTGIAminotran_5 domain-containing protein. (198 aa)    
Predicted Functional Partners:
V4A1W3_LOTGI
NifU_N domain-containing protein; Scaffold protein for the de novo synthesis of iron-sulfur (Fe-S) clusters within mitochondria, which is required for maturation of both mitochondrial and cytoplasmic [2Fe-2S] and [4Fe-4S] proteins.
  
 0.930
V4B3F2_LOTGI
Uncharacterized protein; Belongs to the complex I LYR family.
   
 0.771
V4BHH2_LOTGI
Uncharacterized protein.
   
 0.771
V4AI76_LOTGI
Nfu_N domain-containing protein.
  
 0.726
V3ZVT1_LOTGI
Cytochrome b5 heme-binding domain-containing protein.
   
  
 0.720
V3ZQM0_LOTGI
2Fe-2S ferredoxin-type domain-containing protein.
  
 0.631
V4B9U5_LOTGI
2Fe-2S ferredoxin-type domain-containing protein.
  
 0.631
V4BFF7_LOTGI
Fe-S_biosyn domain-containing protein.
  
 
 0.614
V3ZM40_LOTGI
Adenylyltransferase and sulfurtransferase MOCS3 homolog; Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of cytosolic tRNA(Lys), tRNA(Glu) and tRNA(Gln). Acts by mediating the C-terminal thiocarboxylation of the sulfur carrier URM1. Its N-terminus first activates URM1 as acyl-adenylate (-COAMP), then the persulfide sulfur on the catalytic cysteine is transferred to URM1 to form thiocarboxylation (-COSH) of its C-terminus. The reaction probably involves hydrogen sulfide that is generated from the persulfide intermediate and that acts as nucleophile towards U [...]
   
 0.570
V4B174_LOTGI
Acyl carrier protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis.
    
 
 0.556
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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