STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4CRD4_LOTGITetraspanin. (226 aa)    
Predicted Functional Partners:
V4AIK3_LOTGI
Uncharacterized protein.
      
 0.672
V4AJ10_LOTGI
Tetraspanin.
   
 
0.657
V4B9U4_LOTGI
Tetraspanin.
  
 
0.572
V4BEN5_LOTGI
Tetraspanin.
  
 
0.571
V4BKF4_LOTGI
Tetraspanin.
    
 
0.559
V4B1R0_LOTGI
Uncharacterized protein.
    
 0.544
V4BE86_LOTGI
Tetraspanin.
    
 
0.534
V3ZS21_LOTGI
Glyceraldehyde-3-phosphate dehydrogenase.
      
 0.523
V3ZEA5_LOTGI
Uncharacterized protein; Belongs to the CD36 family.
   
 0.508
V3ZZD4_LOTGI
Uncharacterized protein; Belongs to the CD36 family.
   
 0.508
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.