STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4CSB2_LOTGIUncharacterized protein. (556 aa)    
Predicted Functional Partners:
V3ZRH0_LOTGI
ACPS domain-containing protein.
   
 0.658
V3ZBT9_LOTGI
Uncharacterized protein.
  
 0.584
V4C667_LOTGI
Carrier domain-containing protein.
  
 0.507
V3ZZR7_LOTGI
ATP-citrate synthase; In the C-terminal section; belongs to the succinate/malate CoA ligase alpha subunit family.
   
 
 0.494
V4AFA8_LOTGI
Carrier domain-containing protein.
  
 0.476
V4AYK4_LOTGI
NAD_binding_4 domain-containing protein.
  
 0.476
V4A0I5_LOTGI
Uncharacterized protein.
  
 
 0.461
V4AF44_LOTGI
Uncharacterized protein.
  
 
 0.461
V4C6V0_LOTGI
Fatty acyl-CoA reductase; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols.
  
 
 0.461
V4CQE1_LOTGI
Fatty acyl-CoA reductase; Catalyzes the reduction of fatty acyl-CoA to fatty alcohols.
  
 
 0.461
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.