STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4CSE3_LOTGIUncharacterized protein; Belongs to the protein kinase superfamily. (460 aa)    
Predicted Functional Partners:
V4B5Q1_LOTGI
Protein kinase domain-containing protein; Belongs to the protein kinase superfamily.
  
 
0.980
V4A5F3_LOTGI
Fork-head domain-containing protein.
    
 0.913
V3YZ79_LOTGI
Uncharacterized protein.
 
  
 
 0.900
V3Z6N9_LOTGI
Uncharacterized protein.
    
 0.746
V3ZSN5_LOTGI
Uncharacterized protein.
    
 0.738
V4AUC4_LOTGI
Uncharacterized protein.
    
 0.733
V4BHZ2_LOTGI
Uncharacterized protein.
    
 0.714
V4AL79_LOTGI
Uncharacterized protein.
    
 0.662
V4B3L2_LOTGI
Uncharacterized protein.
    
 0.662
V4A3M6_LOTGI
WD_REPEATS_REGION domain-containing protein.
    
 0.625
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.