STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
V4CSF7_LOTGIVacuolar protein sorting-associated protein 28 homolog; Component of the ESCRT-I complex (endosomal sorting complex required for transport I), a regulator of vesicular trafficking process. (218 aa)    
Predicted Functional Partners:
V4AIK3_LOTGI
Uncharacterized protein.
   
 0.998
V3ZVL8_LOTGI
VPS37 C-terminal domain-containing protein.
   
 0.997
V3ZMA0_LOTGI
GLUE N-terminal domain-containing protein.
    
 0.992
V4AXP0_LOTGI
Uncharacterized protein.
   
 0.989
V4B4I6_LOTGI
Uncharacterized protein.
   
 0.989
V3ZF40_LOTGI
Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.
   
 0.961
V4BKM5_LOTGI
Uncharacterized protein.
   
 0.924
V3Z0G0_LOTGI
Uncharacterized protein.
   
 0.921
V4B2L5_LOTGI
ER membrane protein complex subunit 4; Belongs to the EMC4 family.
    
 
 0.916
V3ZZ94_LOTGI
Uncharacterized protein.
   
 0.911
Your Current Organism:
Lottia gigantea
NCBI taxonomy Id: 225164
Other names: L. gigantea, owl limpet
Server load: low (26%) [HD]