STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ34783.1TIGR02302 family protein. (857 aa)    
Predicted Functional Partners:
SJZ83338.1
Two-component system, chemotaxis family, CheB/CheR fusion protein.
    
 0.840
SJZ33810.1
OmpA family protein.
  
 
 0.816
argH
Argininosuccinate lyase.
     
 0.803
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine.
       0.800
SJZ40585.1
Hypothetical protein.
  
 
 0.795
SJZ89606.1
Protein of unknown function DUF58.
  
   
 0.783
SJZ89645.1
N-terminal double-transmembrane domain-containing protein.
  
    0.776
SJZ89664.1
Hypothetical protein.
  
     0.775
SKA39836.1
beta-N-acetylhexosaminidase.
 
  
 0.753
guaA
GMP synthase (glutamine-hydrolysing); Catalyzes the synthesis of GMP from XMP.
  
 
  0.736
Your Current Organism:
Enhydrobacter aerosaccus
NCBI taxonomy Id: 225324
Other names: ATCC 27094, CCUG 58314, DSM 8914, E. aerosaccus, NCIMB 12535
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