STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ35318.1Uncharacterized conserved protein, LabA/DUF88 family. (209 aa)    
Predicted Functional Partners:
SKA10583.1
Methyltransferase domain-containing protein.
  
     0.745
trmB
tRNA (guanine-N7-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
  
  
 0.704
SJZ35304.1
uracil-DNA glycosylase, family 4.
       0.685
SKA40353.1
DNA topoisomerase-1.
 
 
   0.651
SJZ35326.1
2-amino-4-hydroxy-6- hydroxymethyldihydropteridinediphosphokinase.
       0.646
recO
DNA replication and repair protein RecO; Involved in DNA repair and RecF pathway recombination.
 
     0.617
SKA30156.1
Transcriptional regulator, contains XRE-family HTH domain.
  
     0.607
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
   
   0.604
SJZ31578.1
Transcriptional regulator, contains XRE-family HTH domain.
  
     0.585
SKA34873.1
Transcriptional regulator, contains XRE-family HTH domain.
  
     0.584
Your Current Organism:
Enhydrobacter aerosaccus
NCBI taxonomy Id: 225324
Other names: ATCC 27094, CCUG 58314, DSM 8914, E. aerosaccus, NCIMB 12535
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.