Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SJZ35812.1 | SJZ35972.1 | SAMN02745126_00615 | SAMN02745126_00629 | Predicted dehydrogenase. | Copper-binding protein (NosD). | 0.451 |
SJZ35812.1 | SJZ47186.1 | SAMN02745126_00615 | SAMN02745126_01218 | Predicted dehydrogenase. | Putative MFS transporter, AGZA family, xanthine/uracil permease. | 0.570 |
SJZ35812.1 | SKA20119.1 | SAMN02745126_00615 | SAMN02745126_04097 | Predicted dehydrogenase. | Gluconate kinase, SKI family. | 0.659 |
SJZ35961.1 | SJZ35972.1 | SAMN02745126_00628 | SAMN02745126_00629 | Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family. | Copper-binding protein (NosD). | 0.401 |
SJZ35972.1 | SJZ35812.1 | SAMN02745126_00629 | SAMN02745126_00615 | Copper-binding protein (NosD). | Predicted dehydrogenase. | 0.451 |
SJZ35972.1 | SJZ35961.1 | SAMN02745126_00629 | SAMN02745126_00628 | Copper-binding protein (NosD). | Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family. | 0.401 |
SJZ35972.1 | SJZ47186.1 | SAMN02745126_00629 | SAMN02745126_01218 | Copper-binding protein (NosD). | Putative MFS transporter, AGZA family, xanthine/uracil permease. | 0.405 |
SJZ35972.1 | SJZ55434.1 | SAMN02745126_00629 | SAMN02745126_01599 | Copper-binding protein (NosD). | Mn-containing catalase. | 0.407 |
SJZ35972.1 | SJZ85833.1 | SAMN02745126_00629 | SAMN02745126_02582 | Copper-binding protein (NosD). | Catalase; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family. | 0.435 |
SJZ35972.1 | SKA20119.1 | SAMN02745126_00629 | SAMN02745126_04097 | Copper-binding protein (NosD). | Gluconate kinase, SKI family. | 0.420 |
SJZ35972.1 | SKA30232.1 | SAMN02745126_00629 | SAMN02745126_04914 | Copper-binding protein (NosD). | Quinoprotein glucose dehydrogenase. | 0.433 |
SJZ35972.1 | katG | SAMN02745126_00629 | SAMN02745126_03904 | Copper-binding protein (NosD). | Catalase-peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. | 0.420 |
SJZ47186.1 | SJZ35812.1 | SAMN02745126_01218 | SAMN02745126_00615 | Putative MFS transporter, AGZA family, xanthine/uracil permease. | Predicted dehydrogenase. | 0.570 |
SJZ47186.1 | SJZ35972.1 | SAMN02745126_01218 | SAMN02745126_00629 | Putative MFS transporter, AGZA family, xanthine/uracil permease. | Copper-binding protein (NosD). | 0.405 |
SJZ47186.1 | SKA20119.1 | SAMN02745126_01218 | SAMN02745126_04097 | Putative MFS transporter, AGZA family, xanthine/uracil permease. | Gluconate kinase, SKI family. | 0.612 |
SJZ55434.1 | SJZ35972.1 | SAMN02745126_01599 | SAMN02745126_00629 | Mn-containing catalase. | Copper-binding protein (NosD). | 0.407 |
SJZ85833.1 | SJZ35972.1 | SAMN02745126_02582 | SAMN02745126_00629 | Catalase; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family. | Copper-binding protein (NosD). | 0.435 |
SJZ85833.1 | katG | SAMN02745126_02582 | SAMN02745126_03904 | Catalase; Has an organic peroxide-dependent peroxidase activity. Belongs to the catalase family. | Catalase-peroxidase; Bifunctional enzyme with both catalase and broad-spectrum peroxidase activity; Belongs to the peroxidase family. Peroxidase/catalase subfamily. | 0.832 |
SKA20119.1 | SJZ35812.1 | SAMN02745126_04097 | SAMN02745126_00615 | Gluconate kinase, SKI family. | Predicted dehydrogenase. | 0.659 |
SKA20119.1 | SJZ35972.1 | SAMN02745126_04097 | SAMN02745126_00629 | Gluconate kinase, SKI family. | Copper-binding protein (NosD). | 0.420 |
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