Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SJZ38625.1 | SJZ38646.1 | SAMN02745126_00796 | SAMN02745126_00797 | Transporter, YbiR family. | Polyphosphate:nucleotide phosphotransferase, PPK2 family. | 0.599 |
SJZ38625.1 | SJZ38661.1 | SAMN02745126_00796 | SAMN02745126_00798 | Transporter, YbiR family. | H+-transporting ATPase. | 0.520 |
SJZ38646.1 | SJZ38625.1 | SAMN02745126_00797 | SAMN02745126_00796 | Polyphosphate:nucleotide phosphotransferase, PPK2 family. | Transporter, YbiR family. | 0.599 |
SJZ38646.1 | SJZ38661.1 | SAMN02745126_00797 | SAMN02745126_00798 | Polyphosphate:nucleotide phosphotransferase, PPK2 family. | H+-transporting ATPase. | 0.619 |
SJZ38646.1 | SJZ42087.1 | SAMN02745126_00797 | SAMN02745126_00987 | Polyphosphate:nucleotide phosphotransferase, PPK2 family. | Radical SAM superfamily enzyme YgiQ, UPF0313 family. | 0.493 |
SJZ38646.1 | SJZ42463.1 | SAMN02745126_00797 | SAMN02745126_01005 | Polyphosphate:nucleotide phosphotransferase, PPK2 family. | Radical SAM superfamily protein. | 0.493 |
SJZ38646.1 | SJZ43158.1 | SAMN02745126_00797 | SAMN02745126_01028 | Polyphosphate:nucleotide phosphotransferase, PPK2 family. | Exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase. | 0.648 |
SJZ38646.1 | SJZ61342.1 | SAMN02745126_00797 | SAMN02745126_01859 | Polyphosphate:nucleotide phosphotransferase, PPK2 family. | Exopolyphosphatase / guanosine-5'-triphosphate,3'-diphosphate pyrophosphatase. | 0.607 |
SJZ38646.1 | SJZ70216.1 | SAMN02745126_00797 | SAMN02745126_01963 | Polyphosphate:nucleotide phosphotransferase, PPK2 family. | Outer membrane protein. | 0.568 |
SJZ38646.1 | SKA09499.1 | SAMN02745126_00797 | SAMN02745126_03468 | Polyphosphate:nucleotide phosphotransferase, PPK2 family. | Cytochrome c oxidase accessory protein FixG. | 0.560 |
SJZ38646.1 | SKA09637.1 | SAMN02745126_00797 | SAMN02745126_03476 | Polyphosphate:nucleotide phosphotransferase, PPK2 family. | Oxygen-independent coproporphyrinogen-3 oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family. | 0.486 |
SJZ38646.1 | ppk | SAMN02745126_00797 | SAMN02745126_01027 | Polyphosphate:nucleotide phosphotransferase, PPK2 family. | Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family. | 0.847 |
SJZ38661.1 | SJZ38625.1 | SAMN02745126_00798 | SAMN02745126_00796 | H+-transporting ATPase. | Transporter, YbiR family. | 0.520 |
SJZ38661.1 | SJZ38646.1 | SAMN02745126_00798 | SAMN02745126_00797 | H+-transporting ATPase. | Polyphosphate:nucleotide phosphotransferase, PPK2 family. | 0.619 |
SJZ42087.1 | SJZ38646.1 | SAMN02745126_00987 | SAMN02745126_00797 | Radical SAM superfamily enzyme YgiQ, UPF0313 family. | Polyphosphate:nucleotide phosphotransferase, PPK2 family. | 0.493 |
SJZ42087.1 | SJZ70216.1 | SAMN02745126_00987 | SAMN02745126_01963 | Radical SAM superfamily enzyme YgiQ, UPF0313 family. | Outer membrane protein. | 0.408 |
SJZ42087.1 | SKA09499.1 | SAMN02745126_00987 | SAMN02745126_03468 | Radical SAM superfamily enzyme YgiQ, UPF0313 family. | Cytochrome c oxidase accessory protein FixG. | 0.408 |
SJZ42087.1 | SKA09637.1 | SAMN02745126_00987 | SAMN02745126_03476 | Radical SAM superfamily enzyme YgiQ, UPF0313 family. | Oxygen-independent coproporphyrinogen-3 oxidase; Belongs to the anaerobic coproporphyrinogen-III oxidase family. | 0.483 |
SJZ42463.1 | SJZ38646.1 | SAMN02745126_01005 | SAMN02745126_00797 | Radical SAM superfamily protein. | Polyphosphate:nucleotide phosphotransferase, PPK2 family. | 0.493 |
SJZ42463.1 | SJZ70216.1 | SAMN02745126_01005 | SAMN02745126_01963 | Radical SAM superfamily protein. | Outer membrane protein. | 0.408 |
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