STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ56329.1TRAP-type mannitol/chloroaromatic compound transport system, substrate-binding protein; Part of the tripartite ATP-independent periplasmic (TRAP) transport system. (362 aa)    
Predicted Functional Partners:
SJZ35540.1
TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
 
 
  0.926
SJZ35526.1
TRAP transporter, DctM subunit.
 
 
 0.921
SKA28750.1
TRAP transporter, DctM subunit.
 
 
 0.921
SKA28758.1
TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
 
 
  0.859
SJZ81689.1
TRAP transporter, DctM subunit.
 
  
  0.755
SJZ78055.1
TRAP transporter, 4TM/12TM fusion protein.
   
 
  0.697
SJZ50764.1
Hypothetical protein.
   
 
  0.636
SJZ78077.1
Hypothetical protein.
   
 
  0.636
SKA34738.1
TRAP transporter, DctM subunit.
  
  
  0.620
SJZ36314.1
TRAP transporter, DctM subunit.
  
  
  0.563
Your Current Organism:
Enhydrobacter aerosaccus
NCBI taxonomy Id: 225324
Other names: ATCC 27094, CCUG 58314, DSM 8914, E. aerosaccus, NCIMB 12535
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.