Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SJZ31962.1 | SJZ48719.1 | SAMN02745126_00284 | SAMN02745126_01301 | mRNA interferase MazF. | ATP diphosphatase. | 0.479 |
SJZ31962.1 | SJZ58091.1 | SAMN02745126_00284 | SAMN02745126_01716 | mRNA interferase MazF. | Antitoxin MazE. | 0.981 |
SJZ48719.1 | SJZ31962.1 | SAMN02745126_01301 | SAMN02745126_00284 | ATP diphosphatase. | mRNA interferase MazF. | 0.479 |
SJZ48719.1 | SJZ58091.1 | SAMN02745126_01301 | SAMN02745126_01716 | ATP diphosphatase. | Antitoxin MazE. | 0.429 |
SJZ58091.1 | SJZ31962.1 | SAMN02745126_01716 | SAMN02745126_00284 | Antitoxin MazE. | mRNA interferase MazF. | 0.981 |
SJZ58091.1 | SJZ48719.1 | SAMN02745126_01716 | SAMN02745126_01301 | Antitoxin MazE. | ATP diphosphatase. | 0.429 |
SJZ58091.1 | SJZ58104.1 | SAMN02745126_01716 | SAMN02745126_01717 | Antitoxin MazE. | Predicted nucleic acid-binding protein, contains PIN domain. | 0.952 |
SJZ58104.1 | SJZ58091.1 | SAMN02745126_01717 | SAMN02745126_01716 | Predicted nucleic acid-binding protein, contains PIN domain. | Antitoxin MazE. | 0.952 |