STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ60723.1Type IV secretion system protein VirB2. (119 aa)    
Predicted Functional Partners:
SJZ60740.1
Type IV secretion system protein VirB4.
 
 0.974
SJZ60754.1
P-type conjugative transfer protein TrbJ.
 
  
 0.969
SJZ60832.1
Type IV secretion system protein VirB5.
 
  
 0.968
SJZ60817.1
Type IV secretion system protein TrbL.
 
  
 0.966
SJZ60843.1
Type IV secretion system protein VirB9.
 
  
 0.963
SJZ60736.1
Type IV secretion system protein VirB3.
  
 0.962
SJZ60713.1
Type IV secretion system protein VirB11.
  
 0.955
SJZ60857.1
Type IV secretion system protein VirB10.
 
  
 0.953
SJZ31030.1
Type IV secretion system protein VirB3.
  
 0.898
SKA24775.1
Type IV secretion system protein VirB3.
  
 0.898
Your Current Organism:
Enhydrobacter aerosaccus
NCBI taxonomy Id: 225324
Other names: ATCC 27094, CCUG 58314, DSM 8914, E. aerosaccus, NCIMB 12535
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.