STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJZ70306.1Cytochrome P450. (480 aa)    
Predicted Functional Partners:
SKA25916.1
Acyl transferase domain-containing protein.
 
 0.998
SJZ32772.1
Acyl-CoA synthetase (AMP-forming)/AMP-acid ligase II.
  
 0.995
rplF
LSU ribosomal protein L6P; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
  0.920
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
    
 0.904
SJZ70286.1
Ubiquinone/menaquinone biosynthesis C-methylase UbiE.
   
  0.891
SKA01162.1
3-ketosteroid 9alpha-monooxygenase subunit B.
 
 0.887
SJZ33427.1
ferredoxin-NAD(P)+ reductase (naphthalene dioxygenase ferredoxin-specific).
  
 0.884
SJZ32723.1
Hypothetical protein.
  
 0.882
SKA28326.1
Ferredoxin-NADP reductase.
  
 0.869
SKA37896.1
Undecaprenyl-diphosphatase.
   
 0.856
Your Current Organism:
Enhydrobacter aerosaccus
NCBI taxonomy Id: 225324
Other names: ATCC 27094, CCUG 58314, DSM 8914, E. aerosaccus, NCIMB 12535
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