Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SJZ33810.1 | SJZ85287.1 | SAMN02745126_00480 | SAMN02745126_02560 | OmpA family protein. | High affinity Mn2+ porin. | 0.682 |
SJZ33810.1 | SJZ87476.1 | SAMN02745126_00480 | SAMN02745126_02657 | OmpA family protein. | OmpA family protein. | 0.976 |
SJZ33810.1 | SKA01629.1 | SAMN02745126_00480 | SAMN02745126_03149 | OmpA family protein. | Outer membrane protein beta-barrel domain-containing protein. | 0.976 |
SJZ33810.1 | SKA21145.1 | SAMN02745126_00480 | SAMN02745126_04196 | OmpA family protein. | OmpA family protein. | 0.976 |
SJZ33810.1 | SKA29055.1 | SAMN02745126_00480 | SAMN02745126_04854 | OmpA family protein. | Outer membrane protein OmpA. | 0.975 |
SJZ33810.1 | SKA37272.1 | SAMN02745126_00480 | SAMN02745126_05923 | OmpA family protein. | Outer membrane protein OmpA. | 0.977 |
SJZ33810.1 | SKA39144.1 | SAMN02745126_00480 | SAMN02745126_06143 | OmpA family protein. | OmpA family protein. | 0.975 |
SJZ71249.1 | SJZ78427.1 | SAMN02745126_01994 | SAMN02745126_02279 | Fusaric acid resistance protein family protein. | Ferrous iron transport protein A. | 0.406 |
SJZ71249.1 | SJZ85287.1 | SAMN02745126_01994 | SAMN02745126_02560 | Fusaric acid resistance protein family protein. | High affinity Mn2+ porin. | 0.665 |
SJZ78427.1 | SJZ71249.1 | SAMN02745126_02279 | SAMN02745126_01994 | Ferrous iron transport protein A. | Fusaric acid resistance protein family protein. | 0.406 |
SJZ78427.1 | SJZ85287.1 | SAMN02745126_02279 | SAMN02745126_02560 | Ferrous iron transport protein A. | High affinity Mn2+ porin. | 0.608 |
SJZ85287.1 | SJZ33810.1 | SAMN02745126_02560 | SAMN02745126_00480 | High affinity Mn2+ porin. | OmpA family protein. | 0.682 |
SJZ85287.1 | SJZ71249.1 | SAMN02745126_02560 | SAMN02745126_01994 | High affinity Mn2+ porin. | Fusaric acid resistance protein family protein. | 0.665 |
SJZ85287.1 | SJZ78427.1 | SAMN02745126_02560 | SAMN02745126_02279 | High affinity Mn2+ porin. | Ferrous iron transport protein A. | 0.608 |
SJZ85287.1 | SJZ87476.1 | SAMN02745126_02560 | SAMN02745126_02657 | High affinity Mn2+ porin. | OmpA family protein. | 0.662 |
SJZ85287.1 | SJZ93424.1 | SAMN02745126_02560 | SAMN02745126_02949 | High affinity Mn2+ porin. | Membrane fusion protein, cobalt-zinc-cadmium efflux system; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. | 0.629 |
SJZ85287.1 | SKA01629.1 | SAMN02745126_02560 | SAMN02745126_03149 | High affinity Mn2+ porin. | Outer membrane protein beta-barrel domain-containing protein. | 0.662 |
SJZ85287.1 | SKA21145.1 | SAMN02745126_02560 | SAMN02745126_04196 | High affinity Mn2+ porin. | OmpA family protein. | 0.662 |
SJZ85287.1 | SKA29055.1 | SAMN02745126_02560 | SAMN02745126_04854 | High affinity Mn2+ porin. | Outer membrane protein OmpA. | 0.662 |
SJZ85287.1 | SKA37272.1 | SAMN02745126_02560 | SAMN02745126_05923 | High affinity Mn2+ porin. | Outer membrane protein OmpA. | 0.662 |
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