Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SJZ53912.1 | SJZ92002.1 | SAMN02745126_01542 | SAMN02745126_02874 | Ribosomal subunit interface protein. | PTS IIA-like nitrogen-regulatory protein PtsN. | 0.674 |
| SJZ53912.1 | SJZ92024.1 | SAMN02745126_01542 | SAMN02745126_02875 | Ribosomal subunit interface protein. | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.488 |
| SJZ53912.1 | SKA32162.1 | SAMN02745126_01542 | SAMN02745126_05176 | Ribosomal subunit interface protein. | UPF0042 nucleotide-binding protein; Displays ATPase and GTPase activities. | 0.415 |
| SJZ92002.1 | SJZ53912.1 | SAMN02745126_02874 | SAMN02745126_01542 | PTS IIA-like nitrogen-regulatory protein PtsN. | Ribosomal subunit interface protein. | 0.674 |
| SJZ92002.1 | SJZ92024.1 | SAMN02745126_02874 | SAMN02745126_02875 | PTS IIA-like nitrogen-regulatory protein PtsN. | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | 0.883 |
| SJZ92002.1 | SKA25916.1 | SAMN02745126_02874 | SAMN02745126_04581 | PTS IIA-like nitrogen-regulatory protein PtsN. | Acyl transferase domain-containing protein. | 0.682 |
| SJZ92002.1 | SKA32159.1 | SAMN02745126_02874 | SAMN02745126_05175 | PTS IIA-like nitrogen-regulatory protein PtsN. | Hpr(Ser) kinase/phosphatase. | 0.653 |
| SJZ92002.1 | SKA32162.1 | SAMN02745126_02874 | SAMN02745126_05176 | PTS IIA-like nitrogen-regulatory protein PtsN. | UPF0042 nucleotide-binding protein; Displays ATPase and GTPase activities. | 0.862 |
| SJZ92002.1 | SKA32165.1 | SAMN02745126_02874 | SAMN02745126_05177 | PTS IIA-like nitrogen-regulatory protein PtsN. | PTS system, mannose-specific IIA component. | 0.939 |
| SJZ92002.1 | SKA32167.1 | SAMN02745126_02874 | SAMN02745126_05178 | PTS IIA-like nitrogen-regulatory protein PtsN. | Phosphocarrier protein. | 0.951 |
| SJZ92002.1 | SKA32646.1 | SAMN02745126_02874 | SAMN02745126_05291 | PTS IIA-like nitrogen-regulatory protein PtsN. | Two-component system, OmpR family, sensor histidine kinase KdpD. | 0.592 |
| SJZ92002.1 | SKA34932.1 | SAMN02745126_02874 | SAMN02745126_05581 | PTS IIA-like nitrogen-regulatory protein PtsN. | 6-phosphofructokinase; Belongs to the carbohydrate kinase PfkB family. | 0.972 |
| SJZ92002.1 | SKA35096.1 | SAMN02745126_02874 | SAMN02745126_05631 | PTS IIA-like nitrogen-regulatory protein PtsN. | Phosphotransferase system, enzyme I, PtsP; Belongs to the PEP-utilizing enzyme family. | 0.819 |
| SJZ92024.1 | SJZ53912.1 | SAMN02745126_02875 | SAMN02745126_01542 | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Ribosomal subunit interface protein. | 0.488 |
| SJZ92024.1 | SJZ92002.1 | SAMN02745126_02875 | SAMN02745126_02874 | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | PTS IIA-like nitrogen-regulatory protein PtsN. | 0.883 |
| SJZ92024.1 | SKA32165.1 | SAMN02745126_02875 | SAMN02745126_05177 | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | PTS system, mannose-specific IIA component. | 0.412 |
| SJZ92024.1 | SKA32167.1 | SAMN02745126_02875 | SAMN02745126_05178 | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Phosphocarrier protein. | 0.515 |
| SJZ92024.1 | SKA32646.1 | SAMN02745126_02875 | SAMN02745126_05291 | RNA polymerase, sigma 54 subunit, RpoN/SigL; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. | Two-component system, OmpR family, sensor histidine kinase KdpD. | 0.672 |
| SKA25916.1 | SJZ92002.1 | SAMN02745126_04581 | SAMN02745126_02874 | Acyl transferase domain-containing protein. | PTS IIA-like nitrogen-regulatory protein PtsN. | 0.682 |
| SKA25916.1 | SKA32167.1 | SAMN02745126_04581 | SAMN02745126_05178 | Acyl transferase domain-containing protein. | Phosphocarrier protein. | 0.477 |
page 1 of 3