STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA01510.1Hypothetical protein. (292 aa)    
Predicted Functional Partners:
SKA01480.1
Hypothetical protein.
  
    0.806
SKA21424.1
Anti-sigma B factor antagonist; Belongs to the anti-sigma-factor antagonist family.
   
  
 0.802
SKA01495.1
Putative Holin-X, holin superfamily III.
       0.799
SJZ44662.1
PH domain-containing protein.
  
    0.772
SKA17181.1
Bacterioferritin; Iron-storage protein.
   
  
 0.754
SJZ34062.1
Hypothetical protein.
   
 
 0.611
SJZ34088.1
Hypothetical protein.
   
 
 0.611
SKA27341.1
Cytochrome c.
   
 
 0.611
SKA31957.1
Cytochrome c.
   
 
 0.611
SKA33830.1
Sulfur-oxidizing protein SoxA.
   
 
 0.611
Your Current Organism:
Enhydrobacter aerosaccus
NCBI taxonomy Id: 225324
Other names: ATCC 27094, CCUG 58314, DSM 8914, E. aerosaccus, NCIMB 12535
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.