Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SJZ69702.1 | SJZ89448.1 | SAMN02745126_01941 | SAMN02745126_02751 | NAD(P)H-dependent nitrite reductase flavoprotein subunit. | Putative spermidine/putrescine transport system permease protein. | 0.877 |
SJZ69702.1 | SKA07303.1 | SAMN02745126_01941 | SAMN02745126_03455 | NAD(P)H-dependent nitrite reductase flavoprotein subunit. | Sulfate transport system permease protein; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.877 |
SJZ69702.1 | SKA07309.1 | SAMN02745126_01941 | SAMN02745126_03456 | NAD(P)H-dependent nitrite reductase flavoprotein subunit. | Sulfate transport system permease protein. | 0.909 |
SJZ69702.1 | SKA07327.1 | SAMN02745126_01941 | SAMN02745126_03457 | NAD(P)H-dependent nitrite reductase flavoprotein subunit. | Sulfate transport system ATP-binding protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Sulfate/tungstate importer (TC 3.A.1.6) family. | 0.936 |
SJZ69702.1 | SKA07350.1 | SAMN02745126_01941 | SAMN02745126_03458 | NAD(P)H-dependent nitrite reductase flavoprotein subunit. | Phosphoadenylylsulfate reductase (thioredoxin); Reduction of activated sulfate into sulfite. | 0.940 |
SJZ69702.1 | SKA07365.1 | SAMN02745126_01941 | SAMN02745126_03459 | NAD(P)H-dependent nitrite reductase flavoprotein subunit. | Sulfate adenylyltransferase subunit 2. | 0.940 |
SJZ69702.1 | SKA41520.1 | SAMN02745126_01941 | SAMN02745126_06500 | NAD(P)H-dependent nitrite reductase flavoprotein subunit. | Adenylylsulfate kinase. | 0.999 |
SJZ69702.1 | cysC | SAMN02745126_01941 | SAMN02745126_01861 | NAD(P)H-dependent nitrite reductase flavoprotein subunit. | Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. | 0.999 |
SJZ89448.1 | SJZ69702.1 | SAMN02745126_02751 | SAMN02745126_01941 | Putative spermidine/putrescine transport system permease protein. | NAD(P)H-dependent nitrite reductase flavoprotein subunit. | 0.877 |
SJZ89448.1 | SKA07289.1 | SAMN02745126_02751 | SAMN02745126_03454 | Putative spermidine/putrescine transport system permease protein. | Sulfate transport system substrate-binding protein. | 0.951 |
SJZ89448.1 | SKA07309.1 | SAMN02745126_02751 | SAMN02745126_03456 | Putative spermidine/putrescine transport system permease protein. | Sulfate transport system permease protein. | 0.952 |
SJZ89448.1 | SKA07327.1 | SAMN02745126_02751 | SAMN02745126_03457 | Putative spermidine/putrescine transport system permease protein. | Sulfate transport system ATP-binding protein; Part of the ABC transporter complex CysAWTP involved in sulfate/thiosulfate import. Responsible for energy coupling to the transport system; Belongs to the ABC transporter superfamily. Sulfate/tungstate importer (TC 3.A.1.6) family. | 0.959 |
SJZ89448.1 | SKA07350.1 | SAMN02745126_02751 | SAMN02745126_03458 | Putative spermidine/putrescine transport system permease protein. | Phosphoadenylylsulfate reductase (thioredoxin); Reduction of activated sulfate into sulfite. | 0.754 |
SJZ89448.1 | SKA07365.1 | SAMN02745126_02751 | SAMN02745126_03459 | Putative spermidine/putrescine transport system permease protein. | Sulfate adenylyltransferase subunit 2. | 0.933 |
SJZ89448.1 | SKA09961.1 | SAMN02745126_02751 | SAMN02745126_03497 | Putative spermidine/putrescine transport system permease protein. | Molybdate transport system permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.534 |
SJZ89448.1 | SKA41520.1 | SAMN02745126_02751 | SAMN02745126_06500 | Putative spermidine/putrescine transport system permease protein. | Adenylylsulfate kinase. | 0.997 |
SJZ89448.1 | cysC | SAMN02745126_02751 | SAMN02745126_01861 | Putative spermidine/putrescine transport system permease protein. | Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. | 0.997 |
SKA07289.1 | SJZ89448.1 | SAMN02745126_03454 | SAMN02745126_02751 | Sulfate transport system substrate-binding protein. | Putative spermidine/putrescine transport system permease protein. | 0.951 |
SKA07289.1 | SKA07303.1 | SAMN02745126_03454 | SAMN02745126_03455 | Sulfate transport system substrate-binding protein. | Sulfate transport system permease protein; Part of the ABC transporter complex (TC 3.A.1.6.1) involved in sulfate/thiosulfate import; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily. | 0.999 |
SKA07289.1 | SKA07309.1 | SAMN02745126_03454 | SAMN02745126_03456 | Sulfate transport system substrate-binding protein. | Sulfate transport system permease protein. | 0.999 |
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