STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA13048.1Choloylglycine hydrolase. (365 aa)    
Predicted Functional Partners:
SJZ69220.1
Hypothetical protein.
  
     0.661
queC
preQ(0) biosynthesis protein QueC; Catalyzes the ATP-dependent conversion of 7-carboxy-7- deazaguanine (CDG) to 7-cyano-7-deazaguanine (preQ(0)). Belongs to the QueC family.
       0.639
SJZ35764.1
Disulfide bond formation protein DsbB.
  
     0.603
SJZ38783.1
Glycosyl hydrolases family 18.
  
     0.584
SKA28970.1
Hypothetical protein.
 
     0.543
SKA31096.1
Uncharacterized conserved protein.
  
    0.536
SJZ88187.1
Nitrate/nitrite transporter NarK.
  
     0.532
SKA31101.1
Hypothetical protein.
 
     0.531
SJZ32315.1
Uncharacterized membrane protein HdeD, DUF308 family.
  
    0.494
SKA30635.1
Glutamate decarboxylase; Belongs to the group II decarboxylase family.
 
    0.485
Your Current Organism:
Enhydrobacter aerosaccus
NCBI taxonomy Id: 225324
Other names: ATCC 27094, CCUG 58314, DSM 8914, E. aerosaccus, NCIMB 12535
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.