STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA13177.1Polysaccharide deacetylase. (306 aa)    
Predicted Functional Partners:
SKA16609.1
2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase.
 
 
  0.841
SKA13191.1
Polysaccharide deacetylase.
 
    
0.816
SKA13221.1
Xanthine dehydrogenase, molybdenum binding subunit apoprotein.
 
     0.616
SKA13210.1
Xanthine dehydrogenase small subunit.
 
     0.608
SKA42114.1
Glycosyltransferase, GT2 family.
  
 
 0.528
SKA20686.1
Glycosyltransferase, catalytic subunit of cellulose synthase and poly-beta-1,6-N-acetylglucosamine synthase.
  
 
 0.474
SJZ87212.1
Nicotinamidase-related amidase.
 
     0.471
SKA23830.1
Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family.
  
  
 
0.470
SKA39955.1
Putative urate catabolism protein.
  
  
 
0.468
SJZ37379.1
Peptidoglycan/xylan/chitin deacetylase, PgdA/CDA1 family.
  
  
 
0.467
Your Current Organism:
Enhydrobacter aerosaccus
NCBI taxonomy Id: 225324
Other names: ATCC 27094, CCUG 58314, DSM 8914, E. aerosaccus, NCIMB 12535
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