Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SJZ31936.1 | SJZ56253.1 | SAMN02745126_00280 | SAMN02745126_01636 | Catechol 1,2-dioxygenase. | Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.438 |
SJZ31936.1 | SKA13320.1 | SAMN02745126_00280 | SAMN02745126_03751 | Catechol 1,2-dioxygenase. | Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD. | 0.628 |
SJZ31936.1 | SKA16374.1 | SAMN02745126_00280 | SAMN02745126_03876 | Catechol 1,2-dioxygenase. | Carboxymethylenebutenolidase. | 0.547 |
SJZ31936.1 | SKA20871.1 | SAMN02745126_00280 | SAMN02745126_04155 | Catechol 1,2-dioxygenase. | Maleylacetate reductase. | 0.947 |
SJZ31936.1 | SKA20882.1 | SAMN02745126_00280 | SAMN02745126_04156 | Catechol 1,2-dioxygenase. | Hypothetical protein. | 0.530 |
SJZ56253.1 | SJZ31936.1 | SAMN02745126_01636 | SAMN02745126_00280 | Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Catechol 1,2-dioxygenase. | 0.438 |
SJZ56253.1 | SJZ85924.1 | SAMN02745126_01636 | SAMN02745126_02587 | Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Short chain dehydrogenase. | 0.460 |
SJZ56253.1 | SKA20882.1 | SAMN02745126_01636 | SAMN02745126_04156 | Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Hypothetical protein. | 0.438 |
SJZ77637.1 | SKA16374.1 | SAMN02745126_02250 | SAMN02745126_03876 | DOPA 4,5-dioxygenase. | Carboxymethylenebutenolidase. | 0.540 |
SJZ77637.1 | SKA20882.1 | SAMN02745126_02250 | SAMN02745126_04156 | DOPA 4,5-dioxygenase. | Hypothetical protein. | 0.602 |
SJZ85924.1 | SJZ56253.1 | SAMN02745126_02587 | SAMN02745126_01636 | Short chain dehydrogenase. | Short-chain dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.460 |
SJZ85924.1 | SKA20882.1 | SAMN02745126_02587 | SAMN02745126_04156 | Short chain dehydrogenase. | Hypothetical protein. | 0.480 |
SJZ90782.1 | SKA20882.1 | SAMN02745126_02823 | SAMN02745126_04156 | FAD/FMN-containing dehydrogenase. | Hypothetical protein. | 0.542 |
SKA03594.1 | SKA10058.1 | SAMN02745126_03255 | SAMN02745126_03503 | 2-haloacid dehalogenase. | Hypothetical protein. | 0.432 |
SKA03594.1 | SKA13320.1 | SAMN02745126_03255 | SAMN02745126_03751 | 2-haloacid dehalogenase. | Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD. | 0.422 |
SKA03594.1 | SKA16374.1 | SAMN02745126_03255 | SAMN02745126_03876 | 2-haloacid dehalogenase. | Carboxymethylenebutenolidase. | 0.539 |
SKA03594.1 | SKA20882.1 | SAMN02745126_03255 | SAMN02745126_04156 | 2-haloacid dehalogenase. | Hypothetical protein. | 0.555 |
SKA10058.1 | SKA03594.1 | SAMN02745126_03503 | SAMN02745126_03255 | Hypothetical protein. | 2-haloacid dehalogenase. | 0.432 |
SKA10058.1 | SKA20882.1 | SAMN02745126_03503 | SAMN02745126_04156 | Hypothetical protein. | Hypothetical protein. | 0.445 |
SKA13320.1 | SJZ31936.1 | SAMN02745126_03751 | SAMN02745126_00280 | Predicted flavoprotein CzcO associated with the cation diffusion facilitator CzcD. | Catechol 1,2-dioxygenase. | 0.628 |
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