STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA28193.1Hypothetical protein. (85 aa)    
Predicted Functional Partners:
SKA28171.1
Type IV secretion system protein TrbL.
 
     0.949
SKA28177.1
Type IV secretion system protein VirB5.
 
     0.946
SKA28188.1
Type IV secretion system protein VirB10.
 
     0.942
SKA28154.1
P-type conjugative transfer protein TrbJ.
 
     0.939
SKA28181.1
Type IV secretion system protein VirB9.
 
     0.918
SKA28135.1
Type IV secretion system protein VirB3.
 
     0.914
SKA28146.1
Type IV secretion system protein VirB4.
 
     0.870
SKA28126.1
Type IV secretion system protein VirB2.
 
     0.851
SKA28162.1
Conjugative transfer region protein TrbK.
       0.790
SJZ60817.1
Type IV secretion system protein TrbL.
 
     0.784
Your Current Organism:
Enhydrobacter aerosaccus
NCBI taxonomy Id: 225324
Other names: ATCC 27094, CCUG 58314, DSM 8914, E. aerosaccus, NCIMB 12535
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.