STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA33304.1Malonate decarboxylase alpha subunit. (549 aa)    
Predicted Functional Partners:
SKA33299.1
Malonate decarboxylase beta subunit.
 
 0.999
SKA33301.1
Malonate decarboxylase delta subunit.
 
 
 0.994
SKA33298.1
Malonate decarboxylase gamma subunit.
 
  
  0.990
accD
acetyl-CoA carboxylase carboxyl transferase subunit beta; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family.
  
 0.986
SKA33288.1
triphosphoribosyl-dephospho-CoA synthase.
  
 0.978
SJZ77394.1
Acetyl/propionyl-CoA carboxylase, alpha subunit.
    
 0.843
SJZ36397.1
2-oxoglutarate ferredoxin oxidoreductase subunit alpha.
     
 0.809
SKA33295.1
phosphoribosyl-dephospho-CoA transferase.
       0.802
SJZ40487.1
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase; Belongs to the enoyl-CoA hydratase/isomerase family.
    
 0.786
SKA15930.1
3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family.
    
 0.786
Your Current Organism:
Enhydrobacter aerosaccus
NCBI taxonomy Id: 225324
Other names: ATCC 27094, CCUG 58314, DSM 8914, E. aerosaccus, NCIMB 12535
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