STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA33566.1Putative ABC transport system permease protein. (847 aa)    
Predicted Functional Partners:
SKA33562.1
Putative ABC transport system ATP-binding protein.
 
  
  0.967
SKA33557.1
acyl-CoA thioesterase-1.
 
     0.924
SKA33555.1
2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.
       0.648
SKA33570.1
Hypothetical protein; Belongs to the BI1 family.
       0.609
SJZ47211.1
Lipoprotein-releasing system permease protein.
 
  
 0.591
SKA21449.1
Putative ABC transport system ATP-binding protein.
  
 
 0.581
lolD
Lipoprotein-releasing system ATP-binding protein; Part of the ABC transporter complex LolCDE involved in the translocation of lipoproteins, in an ATP-dependent manner. Belongs to the ABC transporter superfamily. Lipoprotein translocase (TC 3.A.1.125) family.
  
 
 0.578
SKA25104.1
Putative ABC transport system ATP-binding protein.
  
 
 0.578
SKA30183.1
Putative ABC transport system ATP-binding protein.
  
 
 0.576
SJZ47230.1
Lipoprotein-releasing system permease protein.
    
 0.538
Your Current Organism:
Enhydrobacter aerosaccus
NCBI taxonomy Id: 225324
Other names: ATCC 27094, CCUG 58314, DSM 8914, E. aerosaccus, NCIMB 12535
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.