STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA35572.1Predicted arabinose efflux permease, MFS family. (406 aa)    
Predicted Functional Partners:
SKA35568.1
LysR family transcriptional regulator, glycine cleavage system transcriptional activator; Belongs to the LysR transcriptional regulatory family.
  
    0.561
SKA35741.1
Cyanate permease.
  
 
 
0.496
SKA15295.1
Predicted arabinose efflux permease, MFS family.
  
 
 
0.495
SJZ60891.1
Predicted arabinose efflux permease, MFS family.
  
 
 
0.486
SJZ61154.1
Predicted arabinose efflux permease, MFS family.
  
 
 
0.482
SKA33312.1
Predicted arabinose efflux permease, MFS family.
  
 
 
0.478
SJZ96011.1
Predicted arabinose efflux permease, MFS family.
  
 
 
0.477
SJZ93109.1
MFS-type transporter involved in bile tolerance, Atg22 family.
  
 
 0.405
Your Current Organism:
Enhydrobacter aerosaccus
NCBI taxonomy Id: 225324
Other names: ATCC 27094, CCUG 58314, DSM 8914, E. aerosaccus, NCIMB 12535
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