STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA35769.1Regulator of RNase E activity RraA. (237 aa)    
Predicted Functional Partners:
SKA35773.1
Demethylmenaquinone methyltransferase.
 
   
 0.934
SJZ41347.1
5-oxopent-3-ene-1,2,5-tricarboxylate decarboxylase / 2-hydroxyhepta-2,4-diene-1,7-dioate isomerase.
 
   
  0.919
SKA39230.1
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway).
 
   
  0.898
SKA12122.1
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway).
 
   
  0.836
SKA34012.1
2-keto-4-pentenoate hydratase/2-oxohepta-3-ene-1,7-dioic acid hydratase (catechol pathway).
 
   
  0.742
SJZ35146.1
Malate dehydrogenase (oxaloacetate-decarboxylating)(NADP+).
     
 0.722
SKA06924.1
Allosteric NADP-dependent malic enzyme.
     
 0.722
SKA10577.1
Protein of unknown function.
 
  
  0.625
SKA38921.1
Dihydroxy-acid dehydratase; Belongs to the IlvD/Edd family.
 
     0.607
SKA35779.1
Isopenicillin N synthase; Belongs to the iron/ascorbate-dependent oxidoreductase family.
       0.535
Your Current Organism:
Enhydrobacter aerosaccus
NCBI taxonomy Id: 225324
Other names: ATCC 27094, CCUG 58314, DSM 8914, E. aerosaccus, NCIMB 12535
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.