STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA38778.1Predicted arabinose efflux permease, MFS family. (436 aa)    
Predicted Functional Partners:
SKA38767.1
Uncharacterized conserved protein, DUF849 family.
 
    0.765
SKA38772.1
Carboxymuconolactone decarboxylase family protein.
       0.762
SJZ36243.1
MFS transporter, putative metabolite:H+ symporter.
  
  
  0.623
SKA11816.1
MFS transporter, putative metabolite:H+ symporter.
  
     0.612
SKA41823.1
MFS transporter, putative metabolite:H+ symporter.
  
     0.612
SKA34980.1
MFS transporter, putative metabolite:H+ symporter.
  
  
  0.604
SKA02661.1
MFS transporter, putative metabolite:H+ symporter.
  
  
  0.603
SJZ76679.1
Predicted arabinose efflux permease, MFS family.
  
     0.595
SKA24945.1
Predicted arabinose efflux permease, MFS family.
  
     0.570
SKA34884.1
MFS transporter, ACS family, tartrate transporter.
  
  
  0.533
Your Current Organism:
Enhydrobacter aerosaccus
NCBI taxonomy Id: 225324
Other names: ATCC 27094, CCUG 58314, DSM 8914, E. aerosaccus, NCIMB 12535
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.