STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA39333.1Hypothetical protein. (221 aa)    
Predicted Functional Partners:
SKA39327.1
aspartyl-tRNA(Asn)/glutamyl-tRNA(Gln) amidotransferase subunit A.
       0.773
SKA39331.1
Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily protein.
       0.773
SKA16609.1
2-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase.
    
  0.750
SKA39338.1
Branched-chain amino acid transport system substrate-binding protein.
       0.594
SJZ38097.1
2Fe-2S iron-sulfur cluster binding domain-containing protein.
  
     0.564
SKA39323.1
Hypothetical protein.
       0.554
SJZ38081.1
NADPH-dependent 2,4-dienoyl-CoA reductase, sulfur reductase.
 
     0.532
SKA16132.1
Sarcosine oxidase subunit beta.
  
     0.529
SKA16142.1
Thioredoxin reductase.
 
     0.523
SJZ38072.1
Sarcosine oxidase subunit beta.
  
     0.517
Your Current Organism:
Enhydrobacter aerosaccus
NCBI taxonomy Id: 225324
Other names: ATCC 27094, CCUG 58314, DSM 8914, E. aerosaccus, NCIMB 12535
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