STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA40390.1Type IV secretion system protein VirB4. (840 aa)    
Predicted Functional Partners:
SKA40412.1
Type IV secretion system protein VirB8.
 
 
 0.995
SKA40416.1
Type IV secretion system protein VirB9.
 
 0.987
SKA40388.1
Type IV secretion system protein VirB3.
  
 
 0.986
SKA40420.1
Type IV secretion system protein VirB10.
 
 
 0.975
SKA40424.1
Type IV secretion system protein VirB11; Part of the Type IV secretion system. Belongs to the GSP E family.
  
 0.968
SKA40372.1
Type IV secretion system protein VirB1.
   
 0.960
SKA40403.1
TrbL/VirB6 plasmid conjugal transfer protein.
  
 
 0.941
SJZ31077.1
Type IV secretion system protein VirB10.
 
 
 0.918
SKA24819.1
Type IV secretion system protein VirB10.
 
 
 0.918
SKA24809.1
Type IV secretion system protein VirB9.
 
 
 0.894
Your Current Organism:
Enhydrobacter aerosaccus
NCBI taxonomy Id: 225324
Other names: ATCC 27094, CCUG 58314, DSM 8914, E. aerosaccus, NCIMB 12535
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