STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SKA40481.1Hypothetical protein. (208 aa)    
Predicted Functional Partners:
SKA40486.1
Paraquat-inducible protein B.
 
   
 0.948
SKA40489.1
phospholipid/cholesterol/gamma-HCH transport system ATP-binding protein.
 
     0.881
SKA40493.1
phospholipid/cholesterol/gamma-HCH transport system permease protein.
 
     0.844
SKA31074.1
Paraquat-inducible protein A.
 
  
 0.733
SKA31063.1
Paraquat-inducible protein B.
 
   
 0.696
SKA31069.1
Hypothetical protein.
  
     0.604
SKA40497.1
Transcriptional regulator, TetR family.
       0.548
SJZ72735.1
Lysophospholipase, alpha-beta hydrolase superfamily.
  
     0.526
SKA22030.1
Nicotinate phosphoribosyltransferase.
  
     0.441
SKA40467.1
ABC-2 type transport system permease protein.
       0.419
Your Current Organism:
Enhydrobacter aerosaccus
NCBI taxonomy Id: 225324
Other names: ATCC 27094, CCUG 58314, DSM 8914, E. aerosaccus, NCIMB 12535
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.