Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SJZ44145.1 | SKA40784.1 | SAMN02745126_01074 | SAMN02745126_06405 | Iron complex outermembrane recepter protein. | Outer membrane autotransporter barrel domain-containing protein. | 0.450 |
SKA30358.1 | SKA40784.1 | SAMN02745126_04951 | SAMN02745126_06405 | Vitamin B12 transporter. | Outer membrane autotransporter barrel domain-containing protein. | 0.450 |
SKA35154.1 | SKA40784.1 | SAMN02745126_05647 | SAMN02745126_06405 | Outer membrane receptor proteins, mostly Fe transport. | Outer membrane autotransporter barrel domain-containing protein. | 0.450 |
SKA40784.1 | SJZ44145.1 | SAMN02745126_06405 | SAMN02745126_01074 | Outer membrane autotransporter barrel domain-containing protein. | Iron complex outermembrane recepter protein. | 0.450 |
SKA40784.1 | SKA30358.1 | SAMN02745126_06405 | SAMN02745126_04951 | Outer membrane autotransporter barrel domain-containing protein. | Vitamin B12 transporter. | 0.450 |
SKA40784.1 | SKA35154.1 | SAMN02745126_06405 | SAMN02745126_05647 | Outer membrane autotransporter barrel domain-containing protein. | Outer membrane receptor proteins, mostly Fe transport. | 0.450 |