Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OPJ66070.1Polysaccharide deacetylase. (278 aa)    
Predicted Functional Partners:
OPJ66069.1
Putative response regulatory protein.
 
     0.815
ypdA_1
Sensor histidine kinase YpdA.
 
     0.778
OPJ66067.1
Non-reducing end alpha-L-arabinofuranosidase BoGH43B precursor; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.708
OPJ66061.1
Hypothetical protein.
 
     0.686
OPJ57329.1
Hypothetical protein.
 
 
 0.648
xynB_5
Beta-xylosidase.
  
     0.644
OPJ66077.1
Bacterial extracellular solute-binding protein.
 
     0.639
xynC
Endo-1,4-beta-xylanase C precursor.
 
   
 0.601
xynB_1
Beta-xylosidase.
  
     0.594
OPJ65591.1
Hypothetical protein.
  
 
 0.585
Your Current Organism:
Clostridium chromiireducens
NCBI taxonomy Id: 225345
Other names: C. chromiireducens, Clostridium chromiireducens Inglett et al. 2011, DSM 23318, KCTC 5935, strain GCAF-1
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