Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
OPJ66097.1Hypothetical protein. (949 aa)    
Predicted Functional Partners:
xsa
Xylosidase/arabinosidase; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.851
OPJ66067.1
Non-reducing end alpha-L-arabinofuranosidase BoGH43B precursor; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.849
pehX
Exo-poly-alpha-D-galacturonosidase precursor; Belongs to the glycosyl hydrolase 28 family.
 
 0.843
xynD
Arabinoxylan arabinofuranohydrolase precursor; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.805
OPJ57695.1
Extracellular endo-alpha-(1->5)-L-arabinanase precursor; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.805
fruA_2
Fructan beta-fructosidase precursor.
   
 0.802
xynA
Endo-1,4-beta-xylanase A precursor; Belongs to the glycosyl hydrolase 11 (cellulase G) family.
  
  
 0.799
OPJ66065.1
Non-reducing end alpha-L-arabinofuranosidase BoGH43A precursor; Belongs to the glycosyl hydrolase 43 family.
 
  
 0.794
aguA_1
Xylan alpha-(1->2)-glucuronosidase; Belongs to the glycosyl hydrolase 67 family.
  
   
 0.759
aguA_3
Xylan alpha-(1->2)-glucuronosidase; Belongs to the glycosyl hydrolase 67 family.
  
   
 0.759
Your Current Organism:
Clostridium chromiireducens
NCBI taxonomy Id: 225345
Other names: C. chromiireducens, Clostridium chromiireducens Inglett et al. 2011, DSM 23318, KCTC 5935, strain GCAF-1
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