Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
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empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
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from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
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gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
epsJ_2Putative glycosyltransferase EpsJ. (341 aa)    
Predicted Functional Partners:
OPJ66111.1
LicD family protein.
 
  
 0.717
pglF
UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase.
  
  
 0.712
tuaE
Teichuronic acid biosynthesis protein TuaE.
  
  
 0.663
epsJ_1
Putative glycosyltransferase EpsJ.
 
 
0.653
wcaJ_2
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
 
  
 0.620
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
 
 
 0.600
tagE
Putative poly(glycerol-phosphate) alpha-glucosyltransferase.
 
 
 0.592
arnC
Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase.
 
 
 0.587
tam_2
Trans-aconitate 2-methyltransferase.
 
 
 0.582
OPJ65576.1
Hypothetical protein.
 
 
 0.566
Your Current Organism:
Clostridium chromiireducens
NCBI taxonomy Id: 225345
Other names: C. chromiireducens, Clostridium chromiireducens Inglett et al. 2011, DSM 23318, KCTC 5935, strain GCAF-1
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